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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32408663, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRSLNTTT APAASRDRSQ SLLSPSDYDA DAISIRSEQD TDSEDDERQL RARNSRELLA  60
   61 HDRLVLMEEE ELEQMVTETR RKQELERTVS NLPIPNPLRM LARRMSDVSP SRSRSSSSAP 120
  121 GASTDDLVAD KRNKRRARRQ VKRDRLLAEA QHGEDGELMY EMEEGAMKDG SSTGDSSDRE 180
  181 DSDDVDRRGL LHFADAKARR KRDWCRWILI YSLIIVAFAI LFLTAWKLSL TQRGNATSRR 240
  241 PLVSNGTAMF APTTIIFSLD GFRADFLNRG LTPRLSSFIK EGVSPLYMLP SFPSVTFPNH 300
  301 YTLATGLYPE AHGVVGNTFW DPTLREEFYY TDPARSMDPK WWRGEPFWVS AQKQGLKTAI 360
  361 HMWPGSEAHV LDIEPTYMDR YNGKEKLGNK VDRILGFLDM PDDERPQVIA AYVPNVDSDG 420
  421 HKYGPNSTEI RSTIEKVDMM MDKIFKGLEE RHLTDIVNVI VVSDHGMATT DISRLVQLED 480
  481 LVDLSKIEHT DGWPLVGLRP KNPDELEDIY RDLIEKTKTN PNLEVYLRDV NMPERYHFSK 540
  541 NERIAPLWIV PKAGWALVNM KEMNLKEAQA QGVVYHPRGL HGYDHEHPLM RAIFIARGPA 600
  601 FPHEANSRLE VFQNIEVYNI LCDSVGISPA PNNGTIRLPL KPVGLHNDEP GAGIESPVDP 660
  661 VTSYTLSSSA SPLTTSSITT PTTMSTTDSA QSAPASPVTS AITSTKTSST TSKPDTLSTN 720
  721 QPNPHPTDQP PEGDNGTDGD EPSDNNSDSK TPNFWDWFSG EVNKWWGKVS NSGKNNKSDG 780
  781 NSSSAT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle