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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42735978, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYRAVAAGI LAASLLSSPV SSFAAAKKFS DVPSWAQESV DYLVGKKALD GKPDGTFSPS  60
   61 EAVDRGSAAK ILAVVLGLPI DPKAKPSFKD AQNHWAAPYI AAVEKAGVIS GDGTGKFNPS 120
  121 SQINRASMAS MLVQAYSLNK KIIGELPTQF KDLETHWGKK QANILVALEI SKGTGNGWEP 180
  181 EGTVTRAEAA QFIAMADQNK TDTSKRMYMN RNFITYHQPS LSSGITDVQH KPQMVVVKEQ 240
  241 RADGWLKVVT SKGEKWTPLT EKTETINEGF TTYETASHSS KVLGTYNAQT VTVMEESGSW 300
  301 IRIRVGAGFQ WVDKNQLNPV KQENFLEGKA IIIDPGHGGI DSGNVGYYEK ESETVLDVSL 360
  361 RLKKIFEQRA PFTVMFTRTN DTRPGTSGPD SLKKRVEFAQ EHNGDIFVSI HANGSEYKNG 420
  421 QGTETLYYQS ARAKVTNPHV EDSMLLAQKI QDRLVAALGT KDRGIKHQDL YVTRENTMPA 480
  481 VLTELAFVDN KSDADKIATP KQRQAAAEAI YQGILDYYEA KGNNVSSFR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle