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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42780959, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVISNVLA VTVALQVVMA PATSFASTKE FPDVPKNHWA LEAITDLTSK GIIAGYDNGK  60
   61 FGFGDVVTRE QVAALMYRAL KPEAKSDYKN PYSDISAGTT MFPKEILALT DMGIFVGDDK 120
  121 GTFRPKESLT RAEMSVILQR AFKLEVKAPH TFNDIDASYW WAKEAISALQ SNGVSIGNGL 180
  181 GGFDPSGVLT RESYAQLLYR AMQIKKDVPA EQPSYINLDV TLPSNVTAQE IDNYIQRFHP 240
  241 DSPLVGIGQD FIKAQNEYGV NALYLAAHAI LESGYGKSEI AYRKHNLFGL RAYDRDPFAY 300
  301 AKYLPSYGLS ISYNADYVKK NYLEEGARYF KGYTLPAMNV MYSTDTAWAG KIANIMERIK 360
  361 PFNKADYQNA KRLPKNPNTL NVEVLSEAIP YTDYAKDAKA TVQSVGSYYQ VPFPFNNPIK 420
  421 SVPNVTQNEV GKLENGTKVN VYREDPNGWV EFSFENAQEK YWTLKKNLKL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle