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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42738578, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKMKKFTA VIAPVLAMSM ALTACSGSGG EKKTTTTSSG GGDEKKSEIK YAAKQVLNRT  60
   61 ENQEIPTMDT SKSTDTLGAQ ILGNTMEGLY RLDKDNKPIP AAAESSTKSE DGKKYTFKLR 120
  121 KDAKWSNGDP VTAKDFVYAW QRLLDKNTAA EYAFIAYYIK NAEAINKGEK PLTDLGAKAV 180
  181 DDYTLEVELE KPVPYFLNLV AFPSYYPLNE KFVKEKGDKY GLEADTTLYN GPFVMSSWKH 240
  241 EQGWQLKKND KYWDNKTVKL EEINYSVVKE VATKVNLYDT GSIDFTLLSG EFVDKYKSNK 300
  301 DEYGEYSEAS TFFLRLNQKR NGQDTPLKSK KLREAIALSV DKKGLANVIL NNGSKATDQL 360
  361 VPKGLATGPD GKDYQDTFKN GLKYNPKKGA AAWEEAKKEL GKDQVTIELL SYDDGTAKKI 420
  421 ADYVKDQIEK NLKGVTINTK IQPFKQKLKL ETAQDYEISY AGWSPDYADP MTFIDMFESK 480
  481 SPYNQMSYSN AKYDEMVQKA GNELMGDAKK RWETLGKAEK LLLEEDAGLV PLYQTGRAYV 540
  541 MKPNVKGIVK HNISPEYSFK WAYVTEEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle