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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42738686, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKGFYNVLA ASIVFSMVTI PNYSYANEFG KTVTVSSDEQ ALKSIENHMK DEDGRGEDKG  60
   61 VRSEVQGEFL VHIVKEVPLY DSSNFQKETG IRISNQVVKA EKRKGNAYYV QTSSGTGWIQ 120
  121 NSDGNVEVKE IHPLLSEKLV INEESSTYSE PFTSYKEENV LEPQTIQAIG QAGEWFQVKI 180
  181 NNEMKWIHSP SAKFEGTKAS LIQDAAPTRT KRAAAMYVAP IEEKTTDIYG VPLKEMIVPK 240
  241 GNENIRPGYA MNPKYITIHE TDNYSVGANA RNHAIYLYNQ ATGTEDRSAS WHFTVDDKEI 300
  301 YQHLPLNENA WHAGDGAEGT GNRESIAIEI AVNEDGDYNK AVENARKLAA YLMGELNIPL 360
  361 ENVKKHQFWS GKICPAIMIK NNGWEPFLQG TKVYYDANHK DDITGGWYEA DIRELDKRGI 420
  421 MVGDGKGSYW PERLVTRGEF ANLISRSLQL PEGSSNFNDL NTAHPSLIDG INRAASAGII 480
  481 SGRGNGIFAP NDTIKRDEAV IMIDRALQYK KIKGNLVSLP FSDQDLAYDK QAVQRVYGLG 540
  541 IVKGNENNEF MPKGSATRGE SAAFINRMLK VIESK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle