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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42782808, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEQKEANLQ ISGMTCAACA NRIEKGLKKV EGVHDANVNF ALEKTKIMYD PQKTNPQQFK  60
   61 EKVESLGYGI VSDKAEFTVS GMTCAACANR VEKRLNKLEG VNEATVNFAL ESATVNFNPD 120
  121 EINVNEMKSA ITKLGYKLEL KSDEQDGSTD HRLQEIERQK KKFIVSFILS FPLLWAMVSH 180
  181 FSFTSFIYLP DMLMNPWVQL TLATPVQFII GGQFYVGAYK ALRNKSANMD VLVALGTSAA 240
  241 YFYSVYLSIQ SIGSSEHMTD LYFETSAVLI TLIILGKLFE AKAKGRSSEA IKKLMGLQAK 300
  301 TATVVRDGTE MKILIEEVVA GDIVYVKPGE KIPVDGEIVE GKSAIDESML TGESIPVDKT 360
  361 IGDVVIGSTM NKNGFLKVKA TKVGRDTALA QIIKVVEEAQ GSKAPIQRVA DQISGIFVPV 420
  421 VVGIAIITFA VWMIFVTPGD FGGALEKMIA VLVIACPCAL GLATPTSIMA GSGRSAEYGI 480
  481 LFKGGEHLEA THRLDTVILD KTGTVTNGKP VLTDVIVADG FHEEEILRLV GAAEKNSEHP 540
  541 LAEAIVDGIK EKKIDIPSSE TFEAIPGFGI ESVVEGEQLL IGTRRLMKKF NIDIEEVSKS 600
  601 MEELEREGKT AMLIAINKEY AGIVAVADTV KDTSKAAIAR LKKMGLDVVM ITGDNTQTAQ 660
  661 AIAKQVGIDH VIAEVLPEGK AEEVKQLQAQ GKKVAMVGDG INDAPALATA DIGMAIGTGT 720
  721 DVAMEAADIT LIRGDLNSIA DAIFMSKMTI RNIKQNLFWA LAYNGLGIPI AALGFLAPWV 780
  781 AGAAMAFSSV SVVLNALRLQ RVKLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle