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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42738774, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNKINLQMQ NISFVLIIAL AVWLKTYLIT RFSFDLKIES STQELILFIS PLATSLAFVG  60
   61 LALFATGEKR NYIALCINFV LTIVLVGNVM FYDFYSDFVT LPVLGQTSNF GQLGGSIIEI 120
  121 LNYKIILAFV DIIFFFILLK KKSIVFQTGR VTHPARLLYF LLTIGVFFAN LHLAEKERPE 180
  181 LLTRSFDRVM LVKNLGLYTH QVYDLTLQVK AGSQKALADS SKLQETENYV KANQSEPNPN 240
  241 MFGVAKGKNV IVVTLESLQT FLIGATVNGQ EVTPFLNEFI NESYYFDNFF HQTGQGKTSD 300
  301 SEFLIDTSLY PLNRGAVFFT HGNNDYTATP EILRQQGYFT SVFHANNATF WNRNIMYSAL 360
  361 GYDRYYNELD YKITPETNLN WGLKDIEYFD QSVDILKTVD QPFYARFLTL TNHYPFTYDE 420
  421 DTQFIEPYNS GNGVFDRYIV TARYLDESIK KFIERLKAEG MYDDSIIVLY GDHYGISEKH 480
  481 NRAMAQFLEK DQITEFDTLN LQRTPLYIHI PGQTEGRTIS KPTGQIDMKP TILNLLGIDT 540
  541 TNDIRFGHDM FSDEYAGFVV LRDGSFITDK YAYKNNTFYD RITGEIVDLP KEEAEALIKR 600
  601 AQNELRMSDK IIEGDLLRFS ESNKIKTGEV QTKIKETEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle