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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42783452, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGQWGYVAI SFIIGIAIAF SSSVIWLTCC LVLNVFFCLY RTPRKTFFYC MIACLSGAMY  60
   61 TTYVQGQNNP LGDSYEATRG VIHNTPLING DRLSFQVEDQ NKNIVQLSYK MKSALEKKQM 120
  121 RQLHAGVSCV FEGERKEPQI ARNFHGFNYR DYLYKQNIHF ILDATYISEC HKTSLSLVQW 180
  181 ILLLRQQAIS EVAEMFPEQS GAFMNALVFG DRQQMTFEVE EQYQQFGLVH LLAISGSHIV 240
  241 LLMVIVYFIL LRSGVTREVA TVCLIFCIPL YMILAGASPS VIRASITGVF MLIAFMCSIR 300
  301 LSSLDALSIT AICMLIFDPY LVFNIGFQFS FVGSFALLLS TPLLLESGNG VIRNSIYISF 360
  361 ISQLVSTPIL LYHFGYFSPY SIFLNILYVP FLSLVVLSCS IVILICIPVI PFLAKRLANV 420
  421 LSIGLNLSND FLSYCENLPF TRLNFGQTSI LLVALYCVSI ISILMVWERR MAKGILFISA 480
  481 GVFLFISTCH YVYPYFRESG SVTFLDVGQG DAILIRLPYD QEIYLIDTGG TILPNKEEWQ 540
  541 RKKHEFSVGN DILIPYLQKE GIKKIDKLII THGDADHIGA AQQLLSNITV KEVVFGRKEQ 600
  601 DAELEKIVKK QALEKKVKIR EVREGESWSI NGAEFFVLAP TGKESSENNA SIVMLAKLGG 660
  661 LTWLFTGDLE EEGEKFLVAT YPELRADVLK VAHHGSNTSS TTPFLSVVQP NIAVISVGER 720
  721 NRYGHPHKDV IERFEKRGIE IWRTDKQGAI SYVFKGENGT FRSKITYDET HNR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle