YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42783633, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKSTFKWVV GATVSAVLLT GCGFINQEKA TEQIDPPKQV TYTEGGKKEV SKKDKQGQTV  60
   61 NRELYLVDKN GYVVPQTLAI PTPKANEVIQ QTLEYLVKDG PVTNLLPNGF RAVIPANTSM 120
  121 TLNLKKDGTA VIDFSKEMKN YAKEEERQIV ESIAWTLTQF KEIKQVQFQI NGEKLAKMPV 180
  181 GGTPLGEGVS RANGINFDDE QVADVTNTKP VTLYFMAQNN NKQQYYVPVT RRVVEGKEND 240
  241 YAAIVDELVK GPIHQSLLND FNPGVKLITN PKLQDGNLTL NFNENIFINP DKNMISNYVL 300
  301 KSLVLSLTEK KGVKSVSIEV NGKANLIDEK GGKLIKPVDR PENVNTGSF

Type	Start	End	Confidence
Signal Peptide	1	23	0.94
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	349	0.99