YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42784365, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKFIAFMEK YLVPIAGRIG SQRHLVAIRD GFIAVMPLIL VGSFAILINN LPVDAFQKFM  60
   61 KGAFGEVWKD VGGGMWTGSF AILALIVAVG ISYNLAKSYG IDALSAAIIT FGALIIISPT 120
  121 TPKEGGIDLA WTGAQGLFVS IIVALLVTEV FRFFVQRDIT IKMPDGVPPA VMKSFAALVP 180
  181 AFVILIVTAG IQLAVKLAGT SIHKFVFETI QVPLQGLAGT LPSAIIIALL IHVLWFFGLH 240
  241 GPNIIGGIID PIYLPALEKN MKLFDGGMSA YDVPHIFTKP FFDVYVYIGG SGATLAFLVA 300
  301 VMLVAKSAQL RGVGRVSIGP GFFNINEPVI FGTPIVLNPA LIIPFVLTPV VLVITSYTAI 360
  361 SLGWVPKTVA LVPWTMPPIF SGYLVAGGSI AGAALQVVNF AIAVLIYYPF VLMCDRTYVQ 420
  421 AAKAETKGSD NSVSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle