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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|221242750, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKETLKSQFQ NVRFTAFVAL ALWLKTYLIT RTSFDLKLES FMQEFILFLS PLAASLLLVG  60
   61 LALFAKGKKR NYIALGINFV LTIVLVGNVM FYGFYNDFVT LPVLGQTSNF GSLGSSVKEL 120
  121 FNYKIILAFA DIIVFFILLK KMKNFAPTER VARPMRSLYF VSTIAIFFAN LGLAEAERPE 180
  181 LLTRSFDRVM LVKNLGLYVH QVYDLGLQAK SSSQKAFADG SKLQETENYV KTTQSKPDPN 240
  241 MFGTAKGKNV IVVSLESLQT FLIGATVNGQ EVTPFLNQFT KESYYFDNFF HQTGQGKTSD 300
  301 AEFLVDTSMY PLDRGAVFFT HGNNEYTATP EILRQQGYYT AVFHANNATF WNRNIMYPAL 360
  361 GYDRYYNELD YKITPETKLN WGLKDIEYFD QSIDMLKQVK QPFYTRFLTL TNHYPFTYDD 420
  421 NTKLIDEYNS GDGVFDRYMV TARYLDEAMK HFIERLKAEG IYDNSVIVFY GDHYGISENH 480
  481 NRAMAQFLGK EEITAFDHMN LQKTPMFIHV PGQKEGKTIS KPTGEIDIKP TILNLLGVDS 540
  541 TNDVRFGHDV FSPDNKGFVV LRDGSFVTDK YMYTNSTFYD RATGEVVQLP KEESQPLIDR 600
  601 AQNELSMSDK IIEGDLLRFS ESNKIKTGEV KTAIKEEKKS AE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle