YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21960048, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKSDASSGG IHYQVQFKVS LTQTGNGKEF IVKKWLCAAS LGLALAASAS VQAADKIAIV  60
   61 NVSSIFQQLP AREAVAKQLE NEFKGRATEL QGMERDLQTK MQKLQRDGST MKASDRTKLE 120
  121 NEVMKQRETF STKAQAFEQD NRRRQAEERN KILSRIQDAV KSVATKGGYD VVIDANAVAY 180
  181 ADSSKDITAD VLKQVK

Type	Start	End	Confidence
Signal Peptide	1	53	0.88
N-region	1	44
H-region	45	50
C-region	51	53
Cleavage Site	53	54
Non-Cytoplasmic	54	196	0.99