YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85093080
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFARRPIDHG AAGDTLSSET QMATMTSSPV ATPLSSATAA QTSTRKEPPP EKLSDIRRRI  60
   61 WVIVSFWLIV LLLGLPVWWK TTTIHRANLP LKEMLDWADG KACRPVFPLR ISIQANSLPE 120
  121 QEAQNLLRLT QHALDDLNDF SGHHLRLQLS SPAAPQKRND EPDTALTIRL LPGDAVTATL 180
  181 DPYEPVLDIT YPPNAAPSAT SASSSLATYV AGQLRSTFAE EQAIISYLLS SNSIPTDYRP 240
  241 QSLTPEAAES LAKRTTRSLK YAPTYHLTFS LFTSGPLPSS WDIEAAIQDY LKPVLGLLSP 300
  301 IHNFTIDTQV QLYASPGVQN QVLSKDDLSS FINAAEWPLS PSIGGAPTVN FIVFVGNQTI 360
  361 ALSSENAHDS AEGGLTTSQS WLIPQWGTVY LLSLPHDTAH VSVDALKQPL LTFTSHLLSL 420
  421 TGTPSSGSLP LRLSTLSRIR SADLLLRASS TLGSLARLAL ALKSISIPSS VADGVSKTIV 480
  481 HLRQACETLG EAEGLEHARI AEAEAERAFF EKSMVGQLYF PDEHKVAVYL PLLGPVAVPL 540
  541 VMGMLNELKA WRKRKREAAE KGKEKKKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle