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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SHE9_NEUCR
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTTAIRLA ARPSSWRGTG ALSSGRPLSQ FASLPRRSIN PSISGMRQGT LRLSIHDGRL  60
   61 FFSTQPPKDT PENMNNKETG SSNVIFMPPP PPAQTEAPSS GSAKEDTTDA TNKSETETPT 120
  121 AASESETSKS SESDVSSAST SDSANSSETT TTTSETTPEN GNNDTAQPEL PSRTEAHRAR 180
  181 LSARFSTIMD NFQTRLLTAT QTLNDLTGYS AIEQIKRKNA ELEVAHGQAQ SRLRDARHNY 240
  241 KSLTMHRAST QREVTTLLAR KDTWNPLDLE RFTSLYRLDH ELEAQVAQAA QELTEAETEE 300
  301 SRLSADLNAG ILKRYHEEQI WSDRIRRQST WGTWGLMGVN VLLFLVLQFV AEPWRRKRLM 360
  361 KGIAENEKGV IDEVRHELGQ VRQALEASGL RETAHLARLM EQEREIQALA STSSSSGDPQ 420
  421 GGGGRTEGEV EMDIGAEFMA AAAEEAAEEA ATAQQQQQQQ QQQQQQQHHQ TPETQEEPQQ 480
  481 PPLTWKQTAQ KWQQTLSDPQ QIKAAVVDLY SDRRIDLKMR DVSLLALESA ATGAAVVASV 540
  541 AFFVLRSSGS GKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle