YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|254823758
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKLWMTFG PLLVAFAVFL FVLFGPSSLF SKVSSETVEK SATSMNESVI QGLDIQKKAL  60
   61 QEGNYLPIYG SSELSRVDPF HPSVVSKKYN QGYTPFLLGR PGTQSLSHFL DVNALGDDLK 120
  121 GKKVAVVLSP QWFQPKGVSD PSFGANFSPL HAYKFALEDT KNTPERRYAA KRLLSFQVVQ 180
  181 SDSTLKKLLE NIVAKGPKKP HDPKLLNITG NIELKILERK DDLESKYIIG SKQDRVNKGL 240
  241 KELPETLDYQ KLDELAKETG ERSTGNNPFQ VKEHYYQKKI KPIEGKLKNS RKDLRYDQSP 300
  301 EFADLQLLMD AFKKAGADVI FINPPINGKW IDYIGMDKQG LDDYYAKTKE QIESQGFRYY 360
  361 SLEEYQNDAF FLEDPIHLSW RGWVKIDQVL ADFVKEPMQT NYKPTPKEYY FKEHPENGPK 420
  421 KDRK

Type	Start	End	Confidence
Signal Peptide	1	31	0.93
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	424	0.99