YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28922400, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.30
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDLAAAFLG QGDDASIQEE DDGQQGSGSG TDSTTTARTL RQGILKAANL QDKLLEKLLA  60
   61 QVIPVDDGQP HGSGEPGGAN EPSAFGERPG FTVGAMSNNF RRFNARIGVV FKFQAKALRV 120
  121 LSWRRPTHTL SLLAVYTFVC LDPYLIFVLP LAIALFGIFV PSFIARHPAP ASSSEAHAVR 180
  181 NLGYSPRGPP LAPARTFKPT KELSRDFFRN LGDLQNVMDD YSVAHDKIIA LVVPKTNFSD 240
  241 EALSSAIFVL LCGACALMTV TAHLIPWRYI CLVAGWLAIS SNHPTVSRLI GEWQAQYLGG 300
  301 EKEPSATAQA VHDNDKKLEQ IQNHPPGPSP DSSLAAERAF DAWVRSDIIL DDAPETREVE 360
  361 IFELQRLSDT SGEWEPWLFS PSPYDPLSAA RIAGDRPTGT RFFEDVLPPE GWEWSGKKWA 420
  421 LDLWSREWVE ERIITGVEVE TEGERWVYDI YNEHENGVNG SDNGDLGAAL GDGDYETPVR 480
  481 SQDQSRYTPK IGPTISWEEG EEGMGRRGSW RRRRWVRMVK RKNVNAASN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle