YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30256550, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENYLLFILT AMLIIIMPGP GFALVTKNTI SYGTNGGIKT VLGTISGMMI HTIMATLGLS  60
   61 AILMKFSMLF IFIKYAGALY LIYLAIKSIK SAFSKKEDMQ VSVEMNAKDI GTIKSFRQGF 120
  121 TTAILNPKTA VFFLSFLPQF IVNNQSHFFQ FLLLGLTFTT LTAIWYLLYI SLIRQLRTFL 180
  181 RKERVNRTIE GITGAVLLVF GVRLFFQK

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.74
Transmembrane Helix	6	26	0.94
Cytoplasmic	27	36	0.70
Transmembrane Helix	37	63	0.76
Non-Cytoplasmic	64	65	0.55
Transmembrane Helix	66	86	0.80
Cytoplasmic	87	123	0.86
Transmembrane Helix	124	142	0.88
Non-Cytoplasmic	143	147	0.90
Transmembrane Helix	148	169	0.93
Cytoplasmic	170	187	0.85
Transmembrane Helix	188	206	0.91
Non-Cytoplasmic	207	208	0.79