YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85109535
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGRKLGGGR ILGNGKGLAP PTAAAAAAAS SSSPSPSTIA AIHRAASPYA PSDSSTVSFI  60
   61 SPNSTRESIS PSSSAPLPHI PQDLVSNVSL PGPSNGGAQS VGANDNRLVC PICQEEMVTL 120
  121 LQLNRHIDDV HQELPEETQD EVKSWFDKQV RKAKKFQPLN IINQTLRGLD VFESNETQPV 180
  181 LATSAIATAP GRPAEKAVDP EELVTRHHWQ RPTGNDPCTD PTCTRKLGPF SGLVNCRKCG 240
  241 RLFCEEHTMY QMKLSRSANH EPVRGIWCRV CETCFKSREG YNDHWGTVRD HMAEFKAIRA 300
  301 KRVDRHKLEV QRLEKRLTKL TRLLAEMPPE EGSGLLALTG QKSQRKMIEQ SVVSWEEDGA 360
  361 VTNCPFCKQE FGSWTFRRHH CRICGKVVCA DPETASTINT EKPPRIVTTT LDIRMCRDCK 420
  421 STIFSHRDFA ASIAHKPPDQ RAYETLRQFE RGIRMLMPSF QKALLALQPP NEDDYRQDKP 480
  481 PPTSAQVQEA AKIRKRLTDA FAKYDLAARR LRDMKTDSPT QLRLQQSVYA AASAFLHANL 540
  541 IPLKSVPRVL RSNSMQHQHR RLLNGSTSTL SPLRNGESAF SKDAETSSNA GASEASVVQS 600
  601 ELDLEEKEAK ERLVVLEEQM FMVQEMLKSA RAQRRFEEVS ALNRNVEELE AEIERAKEGV 660
  661 RGVEERMGAL YIGG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle