YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MNHG2_STAA8
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEITKEIFSL IAAVMLLLGS FIALISAIGI VKFQDVFLRS HAATKSSTLS VLLTLIGVLI  60
   61 YFIVNTGFFS VRLLLSLVFI NLTSPVGMHL VARAAYRNGA YMYRKNDAHT HASILLSSNE 120
  121 QNSTEALQLR AEKREEHRKK WYQND

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.70
Transmembrane Helix	7	31	0.89
Cytoplasmic	32	45	0.59
Transmembrane Helix	46	64	0.89
Non-Cytoplasmic	65	72	0.46
Transmembrane Helix	73	92	0.78
Cytoplasmic	93	145	0.78