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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49476134, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSNYRSLLI WGVIALILIV SFSLFNGDSQ RSGGGELSYS EFLQKVENNE LQAVTIQGQK  60
   61 LTGKTVENRV ISTYAPRDPG LIQKLESKNV NVKAVPESSG NSIFLNLLFS LLPVIIIVGA 120
  121 WIFFMRQMQS GSRGAMGFGK SKAKLLNEAQ GRVTFQDVAG VEEAKQDLQE IVEFLREPQK 180
  181 FQRLGGRIPR GVLLVGPPGT GKTLLARSVA GEANVPFFTI SGSDFVEMFV GVGASRVRDM 240
  241 FEQAKKNAPC IIFIDEIDAV GRHRGAGLGG GNDEREQTLN QLLVEMDGFE PNESIILIAA 300
  301 TNRPDVLDPA LLRPGRFDRQ VVVPNPDVSG REQILKVHVR NVPLAPNVDL KVLARGTPGF 360
  361 SGADLMNLVN EAALMAASRN KRVVTMQEFE DAKDKVMMGA ERRSTAMTQE EKELTAYHEA 420
  421 GHAIVALNVP VADPVHKATI VPRGRALGMV MQLPEGDRYS MSYRWMISRL AIMMGGRVAE 480
  481 ELKFGKENIT SGASSDIEQA TKLARAMITR WGFSDLLGNV AYGDNQDEVF LGHSVARTQN 540
  541 VSEETARMID AEVRKLIDDA YTNATKILKA KKKEWFALAQ GLLEYETLTG AEIQEVIAGK 600
  601 PPSRTQKNEN ASPRTSSVPK AGASKAEFDQ ETLDKKDAHK ADKEKEKLKA GMEKVKSNHA 660
  661 KSNDSVSKRK KSPGAEKKTQ STKKTPQAAN FSGSKENTEK DLNAAERKGK QEPKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle