YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DXR_PECAS
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQLTILGST GSIGVSSLAV IKANPDKFTV RALSAGYNVK LMLEQCLTFQ PTYASMADEA  60
   61 SATALRQQLA EYGCKTEVLA GVQAACELAA LDGVDQVMAA IVGAAGLLPT LAAIHAGKQV 120
  121 LLANKESLVT CGRLFMDAVE QSDAQLLPID SEHNAIFQSL PEQIQRQLGY ASLSKHGVER 180
  181 IILTGSGGPF RETPVSALAD MTPDQACAHP NWSMGRKISV DSATMMNKGL EYIEARWLFN 240
  241 ASAEQMEVII HPQSVIHSMV RYRDGSVLAQ LGSPDMRTPI AHAMAYPERV ASGAKALDFC 300
  301 QIGALTFLAP DYARYPCLQL AIDACNHGQS ATTTLNAANE IAVAAFLQSQ IRFTDIAAVN 360
  361 QHVIEQLTLP EPTSVDDVLF IDSWARQVAA QTLTHYVR

Type	Start	End	Confidence
Signal Peptide	1	19	0.91
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	398	0.99