YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50120309, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDMNVFDLF LKASLLVKLI MLILICFSIA SWAIIIQRTR ILNAATRDAE AFEDKFWSGI  60
   61 ELSRLYQESQ TRRDSLTGTE QIFHSGFKEF ARLHRVNSHV PEAVVEGASR AMRISMNREL 120
  121 ETLETHIPFL GTVGSISPYI GLFGTVWGIM HAFIALGAVK QATLQMVAPG IAEALIATAI 180
  181 GLFAAIPAVM AYNRLSQRVG KLEQNYDNFT EEFIAILHRQ AFSIDNSK

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.86
Transmembrane Helix	15	36	0.93
Cytoplasmic	37	128	0.90
Transmembrane Helix	129	155	0.73
Non-Cytoplasmic	156	170	0.72
Transmembrane Helix	171	192	0.90
Cytoplasmic	193	228	0.90