YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LOLA_PECAS
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKWLAISCL IAGVTSTAVY ADAAKDLQGR LNKVNSFHAN FSQKVTSTDG AAVQEGEGEL  60
   61 WLKRPNLFNW KTTSPDESAL ISDGKTLWFY NPFVEQVTAT WLKDATGNTP FILITRNDTS 120
  121 DWNKYDVRQK GDDFELTPKS ASGNLKQFAI NVTTNGTIKQ FTATEQDGQR STYVLRNQQN 180
  181 GVVDAAQFTF TPPKGVTLDD QRQ

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	203	0.99