YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50121615, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSACLMPRNS ALHTVLRRFS ATPHWLLLSA TLLFSSQLLA AEPKVTELQD KLDHPWSLAF  60
   61 LPEEQGILIT ERAGNLRLWK AGSALSAPIA GVPKVFAKSQ GGLLEVALSP DFAQNRRIYL 120
  121 SFAEEGSDGK AGTAVGYGKL SEDNKRLENF TVFFRQEPKL STGNHFGGKL AFDRQGHLFI 180
  181 ALGENNERPT AQDLDKLQGK IVRLTVDGKV PSDNPFVNTP NARSEIWSYG HRNPQGLAIN 240
  241 PWSGVLWENE HGPKGGDEIN IPKAGENYGW PIATHGINYS GLQIPEAKGK EIAGMANPDF 300
  301 YWEKSPGISG MAFYNSDRFP QWKNSVFIGA LAEKNLIRLT LDGDKVASQE RLLNDRGERI 360
  361 RDVRLGPDGY LYLLTDHDNG KLLKVGLE

Type	Start	End	Confidence
Signal Peptide	1	40	0.99
N-region	1	31
H-region	32	37
C-region	38	40
Cleavage Site	40	41
Non-Cytoplasmic	41	388	0.99