YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49612211, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTPLAISPA QAHKLLDEGA ILIDIRQPEE YAREHIAQAK SHPLNSSAGY PLTGEDREGK  60
   61 VVIFHCLSGM RSEQNAEILV QSVFPATAFL LNGGMTAWKK AGFPTEINNK QPIEIMRQVQ 120
  121 IAAGALILSG VLLGYSVNST FFLLSGFVGV GLLFAGITGF CGMAKLLMKM PWNGGAKR

Type	Start	End	Confidence
Cytoplasmic	1	118	0.75
Transmembrane Helix	119	137	0.90
Non-Cytoplasmic	138	142	0.69
Transmembrane Helix	143	167	0.86
Cytoplasmic	168	178	0.93