YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49612555, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQRQRGYSQ RGFTLLEIMV VIVILGVLAS LVVPNLMGNK EKADKQKAVS DIVSLESALD  60
   61 MYKLDNNRYP STEQGLKALV TKPTVQPEPR NYPADGYIRR LPQDPWGTDY QLLNPGQHGK 120
  121 LDIFSLGPDG MPGTEDDIGN WNLDKK

Type	Start	End	Confidence
Cytoplasmic	1	11	0.67
Transmembrane Helix	12	33	0.86
Non-Cytoplasmic	34	146	0.74