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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11290783, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSSTLFLCT ALKSSESPTK SQRQHPMSLS RCILGLACLW HGVIASPLGA VPSNIPIATD  60
   61 LQTAAETVAQ PIANSARKLH GKFLHITDLH PDQFYKPHSS TDEADACHRG KGPAGVYGAE 120
  121 VSDCDSPFAL INATFDWIAA NVKDDIDFVI WTGDTARHDS DEGVPRNADQ VLGTNRWIAD 180
  181 KMAELFSDST GRHLEIPIVP TLGNNDILPH NILLPGPNSW LQHYTHIWRR FVPEAQRHSF 240
  241 QFGGWFYVEV IPNRLAIFSL NTLYFFDRNA GTDGCASPSE PGYKQMEWLR IQLHIMRERG 300
  301 MKAILMGHVP PARTDSKKLW DENCWQKYSL WLRQYRDVVV SGVFGHMNID HFFIHDERDI 360
  361 NVGQLAGLAD NSIDIREAMD DELSVTGAAD YLRELRQNWA KLQPPPTDSK NSGQLKKGKK 420
  421 GRKGKKKKPD VWGERYSLSL VSPSIVPNYY PALRIVEYNI SGLEDTPVWR DAAKDAMSIE 480
  481 LEQNDRQKHL DLKRQHPSHM EDDDEIDAQK KKGKKHKGGD SKPKKPDFLI PHPPAKSSPP 540
  541 GPAYSPQPLT LTGYTQYFAN LTHINNITTE ASSALLDHDE EEETWVDWLL RWRKGRHGNR 600
  601 KPIHPKPDPR EFQFEVEYST FNDKLYKLRD LTVKNYVELA YRISKQPKKG KAKSIDVSYE 660
  661 SAAEEEEEEE EEEEEDLFEE VEETDEEEEQ EDDDLSDGEE VDDDSDEDEL ETETFKKHDK 720
  721 KKHKKKKGKK RQNKVWMHFL THAFVSTVEK EDLKKFT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle