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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32419603, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQLNDIPLR PIRTNASTAS RSSNGGGVRK ADQTLSNTLG GAVDSSSSPT EKHGLFHKPS  60
   61 KASHRQAGPS GRRRVRDLSR PGTNMSEDHK LNALGRFYRK VVSFPFVTRY LIYIIPIAFL 120
  121 FAIPLFVLPF TGNVDNIQLG TSDSDKENYT LFWLFLWIEI SWLSLWTAKL VAHVLPHIFM 180
  181 FLCGVVSAGT RKYANVLAAL EINLSLFLWL LASWLVFKFR FTDDSIEWVH TIKRILLSLF 240
  241 ISFGVLLGEK AIVQLISISY HQRSFHNRIQ DSKRDIYLLG LLYDASRTLF PMYCPEFADE 300
  301 DYVISDSINA LLMRDRAEKM RPGGTSTPMR IVGDVHRIGD KITSVFGNIA SEITGKNVFN 360
  361 PTSAHSIVIE ALEKVRSSEA MARRIWMSFA AEGEEALLLD DIIEVLGPHH REEAEECFNA 420
  421 IDADQNGDIS LDEMIRKVVD IGKERKAIAH SMKDISQALT VFDKVLLFVV LIIVIIIFLV 480
  481 VFQSSFVTTL ATAGTTLLSL SFVFAVTTQE FLGSCIFLFV KHPYDVGDRV DIKGPDAEQL 540
  541 IVEKISLLYT VFTRIDKMQV VQVPNIQLNN LWIENVTRSK AMKETVDVAV SYDTSFEDIE 600
  601 LLRLELEKFV RSPDNSRDFQ PDINIMINDV GNLDKTTLKI QIKHKSNWHN EAVRCTRRSK 660
  661 FMCALALALK AVPINGPGGG GEALGGPNNP TYSVAVTDDF AATAREKADK DKAAAKMVNK 720
  721 LRQQEDDDIS GSGKTGSSKM EAEQQAVANI NASDPVAEAL DEWGYDRATL RSRDASPVGR 780
  781 AGDDAASSIA RRNYLSVQRG EAGISPGTYS YGQGYAGQGQ PGPSVSQYAG AAYGAQQNQQ 840
  841 PMSPSSPITS GGLYAGQSTL SPLSQQPQTP QPVYTAPGAT ATTVPPPQTL PAPSPMTLSP 900
  901 TPTPGPSGTN GTNGTGGPVG ARPRGASMSN PTAGVNRPTT TTAPPQGQTQ QIQQGQPPQA 960
  961 QLPGNLPQQA AAAVTGSDLT QTQTSHNQEH R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle