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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85119664
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANPVMEELK QKQDALRARF VGKQLSEVPT PSVVLDLKQV MVNCERMLEA AENLGLQWRA  60
   61 HIKTHKTTEL TRLQVGNHLT IPVLLIVSTI LEAENITPLL KEYQSKDRHV NVLLSFPLFA 120
  121 SAVPRLAAVS SQLGPDGLSV MIDHVDQLPY VKAIHTSSGH PPRVFIKIDV NYGRAGVKTD 180
  181 SPEYPSLVDV LLAAEREGWL VLHGLYTHAG QSYGARKLGD AMHVLHAEFI HAHNAAMKIR 240
  241 EKSPDHAPLV LSVGATPTAT TIQSPWFTGE CDVPTANSQG SMRPFEEELK ELWGGWQKEG 300
  301 YVLEIHAGVY PTLDLQQVAT HARHIGLLSE EDIGISVVAE VASVYPTRGQ NSKPEALINA 360
  361 GSLALGREPV GLDKITSNNE ETAKPYTGWG ALMPWGVLAG TEKKDRSGKI LGERFPNDFR 420
  421 GWQVGKISQE HGILTWVGDE GKKAPELKQT NVTRMPIISE EEEEDGTMLS HPSEEDNHDD 480
  481 GSISGDEDSY DEDDISDDDG DDEHLAPPPP VSQHTFAPPF YGRPPTPLPP SPSLTSLLRP 540
  541 SRPTTPDASD DETVANGGGG GPEGSNEPLP RASPRVPTYE YYGFVLYLFS SLSFLIYLLW 600
  601 AYLPSPFLHA LGIYYYPNRW WSLAIPSFLT MTLVYIYVAL AAYNTEYLTL PLGSIETIVD 660
  661 EAAQVAVVDG KGQIIRHDKK CGIKEEKRQY GHGYGHGRHG STDREVLLPG GGLNWREVWN 720
  721 EGTDAVMDVP LAGLKRPINK LTELLTGSLD CYFHFLSLMP YYRRASVPNM SHQQPLSSSV 780
  781 QPTDIYGGDE VSALVLDPGY CNTRAGYAGE EMPKQVLPSF YGHINGRDVF GDEYIVPKPG 840
  841 FEVRNYMNRD SVVEDWDAAT RMWEHVLVKR LQPERSTPPS KKGINISDDG DVPMEDDGNN 900
  901 NEDATDALEK PLAENPLLMT EAPWNSPKAR EKAIEISMET WGVPAFWLSK TPVLAAFAAG 960
  961 KATALVIDVG GANTSVTAIH DGMVLKRSIQ RSPVGGVWLS SQICKMWDGS EPKVDVVPRF1020
 1021 MVESKKPVEA GAPAEANLRK FNFDIHPSFR AYEEERVLTE FKESVVEVWR GPQRFTTPGN1080
 1081 EDAVRTQPGR VFEMPDGSNQ MWREQRFKVS EGMWDETAAY NSTDEEGRVT KAQTIPALIK1140
 1141 AALEGVDVDL RPNILGNVVV TGSTSLLNGF NDRLNHELAQ MYPGVKIKIH AAGLTTERRF1200
 1201 GAWIGGSILA SLGTFHQMWI SRKEYDENGA GIVEKRCK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle