YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7443088
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRALWTSAS GMTAQQTNLD VISHNMANVN TVGYKKMRAT FQDLLYQTVE EPGAPTSPTT  60
   61 RSPSGFQIGL GTYVSDTYGI FTQGNLTKTD NQLDIAIQGD GFFKIVLPDG TIAYTRNGQF 120
  121 RLDSEGRIVN SDGYPLDPEI TIPADAISVS IAADGTVSVL RQGATEVEEV GRIELAKFVN 180
  181 PAGLRRIGNN LYIQTTASGE PIIDNPGNQG LGTLLQGYLE SSNVNIVEEM VNLIIAQRAY 240
  241 EFNTKGIQAA DEMLSQAANL RR

Type	Start	End	Confidence
Signal Peptide	1	16	0.68
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	262	0.99