YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32422873, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSVDWRGLV LPFAYLIVLT GTFMTFSTIY RKRKAQQSAN LAPWFGPHLQ RNVYLSLLHM  60
   61 EPENGSEKAP KVPESVLRAA LLRRAVEDIH RIIQIRAAKA ACSSLLQRGS IGDDLWQRFQ 120
  121 RAEKEMEEEL RDVVMEANAL APNWGQSIFQ TANEIAANTV LRERLDEIQA QATQEKEWWE 180
  181 KRRATVRSEF MKELEGDEAG TGTPVDTSSV TSSPSNKKGK N

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.67
Transmembrane Helix	8	30	0.86
Cytoplasmic	31	221	0.68