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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9950195, gi|1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQPIHLKDH EKDARLVRRR VIVGAVAVVL LTLVLVARMY HLQVTQYEYH STLSENNRVH  60
   61 VQPIPPTRGI IFDRNGVIIA DNRPSFSLTI TRERTEDLQK TLDTLVEILG LTEDDRAIFE 120
  121 KRMKQGRRPF EPVPIMFELN EEQIARIAVN QFRLPGVDVA TQFVRHYPLK EHFAHSVGYV 180
  181 GRINEQELKN LDPINYSGTH HIGKTGIERF YESELHGTVG YEEVETNARG RVLRVLKRTD 240
  241 PIPGKDIVLS IDSRLQEAAE NALAGRRGAI VAIQPSTGDV LAMVSQPSYD PNLFVTGISF 300
  301 KAYAELRDSI DRPLYNRVLR GLYPPGSTVK PAVALAGLDA GVVTPTSRVF DPGYYQLPNY 360
  361 DHKYRNWNRY GDGWVSLESA IYRSNDTYFY DLAHKLGIDR LHAFMSRFGF GQKVALDMFG 420
  421 EADGLMPSRE WKRKTRRQVW YPGETLILGI GQGYMQATPI QLAQMTALLA NKGHWIRPHL 480
  481 AKTIDGQPPV DPDPMPDIVL RDPANWDRVD YGMQQVVHGA RGTARKVGAT SAYLIAGKSG 540
  541 TAQVVAIKQN ERYDRSKLLE RHRDHALFVG FAPANNPQIA VAVMVENGES GSGVAAPVVK 600
  601 QVMDAWLLDE HGKLKAEYAE PVAPLAAAVA KPEPTAAEPE APALEQ

YRC Informatics Platform - Version 3.0
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