YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9951688, gi|1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQKQETVKA WFGSGSPWVW MNAGAVSIAV IMTIGLLAVI AVRGLGHFWP ANVIEATYQI  60
   61 PGEAAKTVIG EVVQAEEVPR TRLRSAGMPV PEAGPEFMTR ELLKLGNREL YGSDFSWVVG 120
  121 EWLQDIKRPE ALMVLERREW GNFYGYLLSV KENGQVVAEG DAAVGELQKR MQRVDDLYAK 180
  181 LYKLEKGDIG GINHGLERLR LKERKLQLDG KLDAAAQADL AAERSELQAR YKVLEEQLNG 240
  241 LHQEFNRDSV VMRDASGRES EITLGKLVHA YQPNAMGLGT KMTVYFKKLW EFLSDDPREA 300
  301 NTEGGIFPAI FGTVMMTLVM ALIVTPFGVI AAVYLREYAK QGPLTRVIRI AVNNLAGVPA 360
  361 IVYGVFGLGF FVYVLGGSID RLFFPEALPA PTFGTPGLFW ASLTLAILAV PVVIVATEEG 420
  421 LARIPRAVRE GSLALGATKA ETLWKIVLPM ASPAMMTGLI LAVARAAGEV APLMLVGVVK 480
  481 LAPSLPVDGN YPYVHLDQKI MHLGFHIYDV GFQSPNVEAA RPLVYATALL LVVVIALLNF 540
  541 SAIAIRNRLR EKYKALEN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle