YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|11348345
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSFVLLAFT LSLLAGCSSG PRLNTDYTSA NQDSRVQFIV LHYTSTDLPH SLGILTHGGV  60
   61 SAHYLIGDDE PATVYRLVDE NRRAWHAGVS EWQGRTWLNA TSIGIEIVNQ GYRDTPQGRV 120
  121 WYPFSEAQIQ ALIPLLKDIA KRHGITPDRI IGHSDIAPGR KVDPGPLFPW KRLADAGLVP 180
  181 WPKPGELARR LAELNGQLPD VRWFQQQLAR HGYLVPQTGE LEKDTRDVIG AFQMKYRPAR 240
  241 FDGEPDLETA ALLLAVPTS

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	259	0.99