YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7473996
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAGPLLTAI ATSKNFAAFF ATRLRPAGYF EGEMSNSRPF PDLDPTDRQI LSILQRDARI  60
   61 ANTELADEIG LTPAPTLRRV RRLEEEGVIH RYVALLDPKL VNRDLMVMVR VTLDKQTKQG 120
  121 FQDFAEHMRA RPEVLECYLC LGDTDYLLKV CVPNLDAYQR FLVDVLAAIP GVRNTDSTIV 180
  181 VKQEKYTTSL PLDEG

Type	Start	End	Confidence
Signal Peptide	1	17	0.62
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	195	0.99