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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40736851, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALVLKPCA AVSIRGSSCR ARQVAPRAPL AASTVRVALA TLEAPARRLG NVACAAAAPA  60
   61 AEAPLSHVQQ ALAELAKPKD DPTRKHVCVQ VAPAVRVAIA ETLGLAPGAT TPKQLAEGLR 120
  121 RLGFDEVFDT LFGADLTIME EGSELLHRLT EHLEAHPHSD EPLPMFTSCC PGWIAMLEKS 180
  181 YPDLIPYVSS CKSPQMMLAA MVKSYLAEKK GIAPKDMVMV SIMPCTRKQS EADRDWFCVD 240
  241 ADPTLRQLDH VITTVELGNI FKERGINLAE LPEGEWDNPM GVGSGAGVLF GTTGGVMEAA 300
  301 LRTAYELFTG TPLPRLSLSE VRGMDGIKET NITMVPAPGS KFEELLKHRA AARAEAAAHG 360
  361 TPGPLAWDGG AGFTSEDGRG GITLRVAVAN GLGNAKKLIT KMQAGEAKYD FVEIMACPAG 420
  421 CVGGGGQPRS TDKAITQKRQ AALYNLDEKS TLRRSHENPS IRELYDTYLG EPLGHKAHEL 480
  481 LHTHYVAGGV EEKDEKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle