YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|218432323, gi...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAEGHLLFS IACAVFAKNA ELTPVLAQGD WWHIVPSAIL TCLLPDIDHP KSFLGQRLKW  60
   61 ISKPIARAFG HRGFTHSLLA VFALLATFYL KVPESWFIPA DALQGMVLGY LSHILADMLT 120
  121 PAGVPLLWPC RWRFRLPILV PQKGNQLERF ICMALFVWSV WMPHSLPENS AVRWSSQMIN 180
  181 TLQIQFHRLI KHQVEY

Type	Start	End	Confidence
Cytoplasmic	1	67	0.76
Transmembrane Helix	68	90	0.88
Non-Cytoplasmic	91	108	0.88
Transmembrane Helix	109	130	0.90
Cytoplasmic	131	146	0.93
Transmembrane Helix	147	166	0.76
Non-Cytoplasmic	167	196	0.82