YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75177924
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSTEVIAH HWAFAIFLIV AIGLCCLMLV GGWFLGGRAR ARSKNVPFES GIDSVGSARL  60
   61 RLSAKFYLVA MFFVIFDVEA LYLFAWSTSI RESGWVGFVE AAIFIFVLLA GLVYLVRIGA 120
  121 LDWTPARSRR ERMNPETNSI ANRQR

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.92
Transmembrane Helix	12	35	0.93
Cytoplasmic	36	65	0.94
Transmembrane Helix	66	86	0.94
Non-Cytoplasmic	87	97	0.84
Transmembrane Helix	98	121	0.87
Cytoplasmic	122	145	0.97