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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32527745
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREKDFKQEG VEKYLWDLNS RVLQANERDR ESEAKRPSRW TAGIPASMSP RRSVCWFVLG  60
   61 QLLCSCALAL QGGMLFPKET PSRELKVLDG LWSFRADYSN NRLQGFEKQW YRQPLRESGP 120
  121 TLDMPVPSSF NDITQEAELR NFIGWVWYER EAVLPQRWTQ DTDRRVVLRI NSAHYYAVVW 180
  181 VNGIHVVEHE GGHLPFEADI TKLVQSGPLT TFRVTIAINN TLTPYTLPPG TIVYKTDPSM 240
  241 YPKGYFVQDI SFDFFNYAGL HRSVVLYTTP TTYIDDITVT TDVDRDVGLV NYWISVQGSD 300
  301 HFQLEVRLLD EDGKIVARGT GNEGQLKVPR AHLWWPYLMH EHPAYLYSLE VTMTTPESVS 360
  361 DFYTLPVGIR TVAVTKSKFL INGKPFYFQG VNKHEDSDIR GRGFDWPLLI KDFNLLRWLG 420
  421 ANSFRTSHYP YSEEVLQLCD RYGIVVIDEC PGVGIVLPQS FGNVSLRHHL EVMDELVRRD 480
  481 KNHPAVVMWS VANEPVSSLK PAGYYFKLIV FQGLKTSDSP RTGVTALVNY HAPYVDVICV 540
  541 NSYLSWYHDY GHLEVIQLQL TSQFENWYKM YQKPIIQSEY GADAVSGLHE DPPRMFSEEY 600
  601 QTALLENYHL ILDEKRKEYV IGELIWNFAD FMTNQSPLRV TGNKKGIFTR QRNPKMAAFI 660
  661 LRERYWRIAN ETRGLIQVNQ SFVVDDEEKE VQHICGDADD AKLLQHKVQN VGQDSVIAAG 720
  721 ALICSYCTRN RAHELCKLST VPSQDAGAQE RGQQLSIQAT GWAVTINKAC SHFQVRQLKT 780
  781 THVAHSIAVF KPDRPLRSCL LDISAGSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle