YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44980502, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCHVMNEKFS ASSRRATRAQ SHHQVKHDGG PTEHRPVEGS HKVSARQGYQ TKELRWDMSF  60
   61 LFGSKKQDSG ADDRKLQETL GFDPQQVTNV ANIIATPGAL DPSRLHPLAG LERGVEYLDL 120
  121 DEEKLSSVEG SQGLIPSRGW TDDLCYGTGS VYLTGLGLGG AYGFFEGLRN IPPNAPGKLQ 180
  181 LNTVLNHITR RGPFLGNNAG VLALTYNLIN STIEGLRGKH DAAGSIASGA IAGALFKSSK 240
  241 GLKPMYYASG SMALVAAGWC GLKTLLL

Type	Start	End	Confidence
Cytoplasmic	1	143	0.69
Transmembrane Helix	144	165	0.40
Non-Cytoplasmic	166	244	0.52
Transmembrane Helix	245	266	0.74
Cytoplasmic	267	267	0.43