YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45187773, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWSFNYLLTQ SRGILGSLPP GKLPSWLLFI SVVSVFNSVQ TYINKELTRR VYENKPSETT  60
   61 DLSARTFGTW TLLSSVIRLY GAFYLYDERI FQLTFITYSI ALLHFGSEWL IFRTCKLGKG 120
  121 FMGPLLVATT SLVWMYNTKE YYTGRGW

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.80
Transmembrane Helix	21	43	0.79
Cytoplasmic	44	61	0.86
Transmembrane Helix	62	82	0.79
Non-Cytoplasmic	83	89	0.70
Transmembrane Helix	90	112	0.82
Cytoplasmic	113	119	0.72
Transmembrane Helix	120	138	0.77
Non-Cytoplasmic	139	147	0.74