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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45188166, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEVPRNTLL QACMWILFWA ALFPFGGCVD AHKKDGPGRE YIRGSLSSQS AGISGAPVLA  60
   61 RQRIGSQIPE MYRAASTKAF KNKMDSDVQV TTPQAISGKA LTTKKDEAVR VADSEVASLN 120
  121 YFDPPAKSML FLSGNHKDLE SLTLADILLA TDIEGGLHAL NRDNGQLLWS IPSDKLSPLL 180
  181 TVSEPTSLNN ETLIVEPYGD GNIYYFSTYQ GLQKLPVTIK HLVDLSPMDL KTQIIVDELG 240
  241 TTLEDEKIYT GSRTTAIYTI DVFTGDIISV YGPGTEKKAY NTTQVNCTRD SFHNDGCENI 300
  301 LVIGKTIYEL GIHTKDNTVY NVTYAQWQHN SIDNYLASKN RKSQDGIYVA PFRDKSLLAI 360
  361 DSDFKMAKWV SPKFTGIINN VFDIYLDYST NEKILLPHPL KPPEDTDSSN LQVYLDQTEN 420
  421 QSWFALSSEY FPSLVETAPK SKFSVSEKWR NTRIFEDSNL FKAAIYGVHE LEHSPFDNFF 480
  481 INDQEYHYDA FLDNNGKLLD PSPNEKLPYN VLDSKSVERY MSPDEILQYK IRLHEQVTRD 540
  541 VLSRGSDTFA SLFARFIYRV FESGLVLILS VFLVILLSNF KLIPPVHVLL ERGGIIPKQP 600
  601 LVAARVDITE SVAVDQREPE QDRSVGSDDA KGTDAEKSDG QGDDETRETE KRKRKRGKRG 660
  661 GKNNKKRPTI VENGQSIRIF ENENDLKHLA ISDKILGYGS SGTVVFQGSF QHRPVAVKRM 720
  721 LIDFFDVASH EIKLLAGSDD HPNVVRYYCS EVTEKFLYIA LELCTATLED VIELKGDSPK 780
  781 FLELQQRINP INVLFQIASG ISHLHSMKIV HRDLKPQNIL VAPSKAFLHQ NQDVSSIRIL 840
  841 ISDFGLCKKL EAEESSFKTN INNAAGTSGW RAPELLNGKL SILETIESEE SSTTQDTAKT 900
  901 TQSSEPLVYD PVTKKRLTRA IDIFSLGCVF YYVLSKGKHP FGDRFVREGN ILKGEYSLED 960
  961 LNKTLRDRST VLEAKNLIEQ MIQYDPLKRP TAHLLLRHPL FWPVPKKLEF LLKVSDRFEI1020
 1021 ERRDPPSQLL LKLEASSTKV IPNKDWHAKF DQVFMDNLGK YRKYHGEKLM DLLRALRNKY1080
 1081 HHFHDLPEEL AELMGPIPDG FYYYFIKRFP DLLMEIYYVV KANLRDDQIL TEFL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle