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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PPN1_ASHGO
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAEEGRRLQ MKNGEGVGRS GRPEWALWIA ALMAGALWWT VHSDAVALLS KACGKDAATT  60
   61 PRRRRALRGR FLHITDIHPD PLYVEGSSIA GACHGDPARD ASDRAGRFGD AMGGCDAPMD 120
  121 LMNYTLAWVA THLRDEIDFV VWTGDNARHD NDRRQPRTAE QILHMNAQVA DQFYELFQQQ 180
  181 RDGDTMQGVP VVPSLGNNDV FPHNMFSLGP TLMTRQLQRI WAKFIPEEQR QAFEHDTSFF 240
  241 VEVIPDRLAV ISFNTLYFFK SNPLVDNCND KAQPGHALLL WLGSVLEEMR ARNMKVWLSG 300
  301 HVPPIPKNFE GSCYNKLAWW TYEYRDVIIG GLYGHMNVDH FYPADGKAAK KSIKRRGKAR 360
  361 TKERNTQEQP LDILDDSVDN LFSGRGAMPL RKEKYMRRLF KDVYCPIAKR LEDKGKQEQS 420
  421 YERYSMVHVA ASVIPTFNPG FRVWEYNLTG IDNAVAPAPW TRLVRRAQQI LSPLRKKKHG 480
  481 PDRTLPPKKP KHLAAGPGHI PQALTPIRFT QYYADLAEIN KDYARELEAG RSHDEAAAAA 540
  541 FRYKIEYTSE DEPYPMESLL VRDYVKLASK LTEDRTAWKT YVRRAFVSSG YRDN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle