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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45198593, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKNKKQAAE GEEARRGSES SGSSAEPSGA VAELPSFKKT AGGARSGLIE QDAVDTIREQ  60
   61 TAVKFADEDE VVEQDEAAQK TEAVASESSS LADKEECDES KLDHFRKFFR RTSSRSSDEG 120
  121 EGGGMMERFI NMTGGGMVPV VTEAPEEDEE AGPDPTAEAE AAAREIMKAH HLSSGQSVDM 180
  181 MSMSSSGESG FFMPVAEHYD DEYNPEQEEE QRDDMSEATY VPPPQHVRGG VLGSLLRLYQ 240
  241 NQPGGQAPQR PGLRKSAQTL SSETLPTGES YEMPKFKAKR PRGSKIPNPI KLKRKSAMSE 300
  301 ARITVHIADL LQRHRFILRL CKAFMMYGAP THRLEEYMVM TSRVLEIDSQ FLYLPGCMVV 360
  361 SFGDTITRTS EVQLVRCSQG LNLWKLHQVH SIYKQVVHDI ISVEDASRTI ETIMAEKNLY 420
  421 PAWMCVLLYG FCASMVTPFA FGGDWINLVV SFGIGCCVGL LQFIVAQRSH VYSNVFEITA 480
  481 SIVVSFCARA LGSIPNSNIC FGSTVQGSLA LILPGYIILC GSLELQSRSL VAGSVRMFYA 540
  541 IIYSLFLGFG ITLGAALFGW IYRDATNETV CEKELSPWFR FIFVPGFALG LSLINQARWS 600
  601 QIPVMVCIAC SGYVVTYWSG QHFTASTEFT ASIGAFVIGI MGNLYSRIWK GLAMTAMLPG 660
  661 IFVQVPSGIA SKSTLLSSVQ SANNMVSNGT NAAVNSVDGR TSISFGITMI QVCIGISVGL 720
  721 FASTLVVYPF GKKRTGLFTL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle