YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44985068
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRNGSRLLG RLTSPAHFPR VGRMNLFCNL RRDFTNGQDA APKKKGLKAL MQTYGWSALA  60
   61 VYMAISAIDL PLCYFGVHSL GEKTIKVYMN RLKNVFDCGK EEHLLISEIE ILQEERERIK 120
  121 QTASGESIWR QLMNSNFLTE FLIAYGIHKS LVFIRVPITA AATPAIVKAL QHWGFNIGKL 180
  181 KKVASKADK

Type	Start	End	Confidence
Cytoplasmic	1	52	0.61
Transmembrane Helix	53	72	0.65
Non-Cytoplasmic	73	189	0.65