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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45199001, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVIRWTVAI CVFVLQAYAA VQDPASLREY DNFTNRSLLW APYRANCYFG VRPRYVNAEP  60
   61 FLMGLMWMNT KTVEAIGKIR HFVDTQDDMT KYGWEMYDPR IGGKQVILDT VNNLNLTIYF 120
  121 VKSHDGVNWG FRVRGEALDK SSPLDSASII YYMKQNGDSK ENYLTSEQVT SDNKLRLTGY 180
  181 SGELGEYEVL ISTVKGNSYK KAKVLSSEAD PSRIAHLSMV VPDDRVWNAN EIFQSLLVDS 240
  241 IQQYMAESDE DVELLQIPSA MTIRNIHNFA PSKFHFVQKT FDISESPFEI DFLYNKKGSQ 300
  301 NPISSVDELI KPVLDTIRSK FDSRFEIKDA RVRQFAIETL SNLIGGLSYF HGKQLVDRKT 360
  361 VFDEELFSSI ELNHPEEEGP HDLFTFVPSR ASYPRGFYWD ERFHLLQVME YDFDLALEVL 420
  421 RSWLGLVEDD SGWIARELIL GEEARSKVPK EFQTQNPHIA NPPTLALAFS EMLNEVLGSG 480
  481 LLHFDLTDEN LGSFSGNSGE TLKKDHELLA AYSERLYEKL LAQFNWFRST QRGMTEEYLD 540
  541 LADVDEDSIH VEDAYHWVGR TFTHCLPSGL DDYPRAQPPD MAELHVDALS WVGIMSRSMK 600
  601 QIAAILGRHQ DAERFHKIEQ NVIDNLNNLH WSEEHQSYCD LSIDDDLDTR KFVCHEGYVT 660
  661 LMPFALKLIA TEDERRIRRM VEVLSDPDRL LSDFGIRSLS KMDEYYETGE VYWRGPIWVN 720
  721 INYLCIDALR YYFGEESDAE KYDHKLVKQA KQLYHQLRNN LLNNIIDVWE KDGYCYEQYN 780
  781 QNDGKGQRVQ HFTGWTALAV NLAGKFPEYI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle