YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33239774, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGRIQRALG WLLPGLVVKR WMLTSGLGLI VALFGASIWA DLRPIYWVIE GIFLLIGTIT  60
   61 KFLPRSITGP IVFLVGISLL IWGQSRSFKS IQNAIAPEKD DVLIDALRAK SKLNRGPNIV 120
  121 AIGGGTGLSA LLQGLKRYSS RITAIVTVAD DGGSSGILRR ELGVQPPGDI RNCLAALSTE 180
  181 ESLLTRLFQY RFSSGTGLVG HSFGNLFLSA LTSITGNLET AITASSRVLA VQGQVVPATN 240
  241 ADVRLWAELE NGERIEGESA IGNVRSPIIR IGCYPEQPPA LPSAIEAIEN AELIVLGPGS 300
  301 LYTSLLPNLL VPEIVEAIQR SKAPKLYICN LMTQPGETDG LDLAGHIRAI EAQLASFGVT 360
  361 RRIFNSILAQ KELPPSALLE YYLSRGAEPV ICDWNRLRSQ GYRLFKASLQ ESKIISKSVL 420
  421 RHDPRKLSLA VMRFYKKYKR DA

Type	Start	End	Confidence
Cytoplasmic	1	20	0.90
Transmembrane Helix	21	40	0.96
Non-Cytoplasmic	41	61	0.71
Transmembrane Helix	62	83	0.86
Cytoplasmic	84	115	0.75
Transmembrane Helix	116	135	0.49
Non-Cytoplasmic	136	442	0.80