YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238879988
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLNVVIRFT NSLSASEQVP DLSIPLSINY DVDDVNKLVN VVWLKTTIRS KVPQCANKRL  60
   61 RLIYNGRVLN EKTDFKKEVL KPQLNLDQIY IHCVIGDELT REQLAQENQL DNKPQEVSTN 120
  121 PEVIGFDRLL QQGFSQDDVT DLRRQFLSIY GSDNTSSGGD IADVEEDEHR QNRLRQLEER 180
  181 WIESTSNNEA AGTANEQTPL TQDGDQAQAA TTPSQPMDLD ESRVNEDLLL GFCVGVFLGI 240
  241 ISVVFLLADD SVFNKRQKMS IIAGLFINFS LAIVRGQWI

Type	Start	End	Confidence
Non-Cytoplasmic	1	227	0.67
Transmembrane Helix	228	248	0.95
Cytoplasmic	249	258	0.58
Transmembrane Helix	259	278	0.84
Non-Cytoplasmic	279	279	0.64