YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.3767, orf1...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVVSRMDKF NEKSLINAYV SRDGENFVRA DLDIDIKYGV MSFLPSSVSS LFLTIMDFNS  60
   61 RAFQTASFYG SDSSGLHFTK LLDNVAGGNI QKIENIDGAW IANIGVDSNN PYDGDKSLLD 120
  121 NLFGGTYAKS IVSKVSINDG KDWSLIKLND NSCKIEDECS LHLWDFTELD GEGKFVTGPT 180
  181 PGILLGVGNK GKNLAHEFEK MKTYVSRDGG VTWNKALDFP AVFAFGDQGN VILAVPYNGK 240
  241 KKYEAAKHFY FSLDQGKSWE KVDLEHPIYP LSILTTIDGT SRKFIIGGID DSRRAENEYI 300
  301 YSVDFTNAFD GKTCGDDDFE EFVARKSNDN GNDEPLCVYG HREKFRRRKQ DAKCFVNKLF 360
  361 EDIKVIEDPC QCTEHDFECG PGFRISEKES TNVCVPDRKQ LTQLCQSKSE ITLPNKVLVE 420
  421 GNKCNMGDKK LEDFVSQETL KCSDYVDNGG DGNGDEQNPN QGDSNQIEVH INDFEGKLSQ 480
  481 YQYIAESKDN NAADNVVIKT MDDRLWISNN GGVSFVRVPI SDKILGFYAG PIPGQITLIT 540
  541 ATNIIYVSDD GGATFIKRKV PTQPSPRVDR AIAFHSKNVE RFIWFGEECE SNGRCTSNAY 600
  601 ITDDAGATFN KLMANVRTCD YVGAVLESGD HELIYCSGQN SLDNNNNNKN KNKLALFSLK 660
  661 ESSSEEPKKI FENIVGYAIT GTYVVVATID DKTDSLLSKV TVDGDIFADA DFPHDLKVEP 720
  721 HQAFTVLDSS SKAVFMHVTT NEKPNFEYGQ LLKSNSNGTY FVLTLDNVNR NTVGYVDFDK 780
  781 IDGLEGTIIA NVVANAQANE GTKNLQTLIS HNDGSEWDKL VPPTIDSEGI KYPCTGQSLN 840
  841 KCALHLHGFT ERADYRDTFS SGSATGFLIG VGNVGEFLTP MDDPSTATFL STDGGVTWKE 900
  901 IKKGVYMWEY GDQGTILVLV NAVENTDVLY YSLDEGQTWK EYKFSDYKVN IYDLATVPTD 960
  961 TARKFIIFAE NPKDHRDIQT FTIDFTNIYP RQCQLNLDDP EHDDYEYWSP THPIGGDKCI1020
 1021 FGHESKYLRR AKGHTDCFIG SAPLSEGYKL EKNCSCTRRD YECDYNYVRD VNDNTCKLVK1080
 1081 GMTSADRKTT MCSKENAFQY FESTGYRKIP LSTCKGGQQF DNWNPKPCPG KEKQFNEYYG1140
 1141 REVKGHKLFF LIFIPLIIFL ATVLFVYDRG IRRNGGFKRL GQIRLNDDDD DFNPIENDQI1200
 1201 DVVVNKIVKG GVYTVAVLIA TVKTIRKIDR MMLEKLGNVI FRRSPGRRNY VSVPNDLDEE1260
 1261 EELFGDYQDN LDDELEDAVF NQDDNLVRTP FADDVEEEEE EREGEGEGEQ SNPSDERLFD1320
 1321 IDDNEDEDEQ HEVNKPTTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle