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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.4175, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFHAPLNGS SKNSKSSAFA SFDSASVMQI VNKAKDKIVP DAQFHQTITD QGIRHYQEKL  60
   61 SPLLQNSYHG ANVNTNKQDS SPMKSPVTLQ HALNVRLESI LSLNVRPGEP FFVLWFLISS 120
  121 YFPLIAACLG PLANMISIVA LVEHWKVDII TRKNVPDIPK VVVMNAVSLA LGLIGNISLL 180
  181 MNFSRSVKYL VSQSVSIIAW LCASALLAAA LFVTNREFGG ENPKYVPSEG FYFAAFTSGN 240
  241 YFVCMLILVI NFMGYSLKKY PPTFNLDQRQ RTLMLFTILF STWTVIGAFT MGSLIDDISY 300
  301 GSALYYCIVS FLTIGLGDIL PETSGAKVAV LVFSLGGVLI MGLIVATLRS VILSSAAPAI 360
  361 FWNDVEKTRI ALLAQLDKEN RHLTSEESFH EMRVLRRKVK SRHKKVSLAL TIAVFMIFWL 420
  421 IGALIFQKIE KWSYFNAMYF CFLCLITIVY GDYAPKTSLG RVFFVSWAVG AVPLMTILVS 480
  481 NVGDTLYEIS NDISAWFSTW MFSTKEEYRD LKWKKKKLQE DQEDQLTVNS EAVRSSELDE 540
  541 DLDLAKMEQE ASLEARDNSS NGEIGAASID NPNEDVKVKD NDTCITNSSN SNMRKDQENN 600
  601 SYSERSVCKS EKQNFDIERI RQKIASKKQV HEMLIDYLEK MKPLIGDSIE SPNRKYSYKQ 660
  661 WKGAYDGFWL SESSPLRLPL KEPNYLILKI YFEIEMMLRG LVDMEIEDLK TLTIQDVSNE 720
  721 LSSSSSTDIK FARTIKFDDD K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle